linelist: Tagging and Validating Epidemiological Data

Provides tools to help storing and handling case line list data. The 'linelist' class adds a tagging system to classical 'data.frame' objects to identify key epidemiological data such as dates of symptom onset, epidemiological case definition, age, gender or disease outcome. Once tagged, these variables can be seamlessly used in downstream analyses, making data pipelines more robust and reliable.

Version: 1.1.0
Depends: R (≥ 3.1.0)
Imports: checkmate, dplyr, lifecycle, rlang, tidyselect
Suggests: callr, knitr, magrittr, outbreaks, rmarkdown, spelling, testthat, tibble
Published: 2024-02-28
Author: Hugo Gruson ORCID iD [aut, cre], Thibaut Jombart [aut, ccp], Tim Taylor [ctb], Chris Hartgerink ORCID iD [rev]
Maintainer: Hugo Gruson <hugo at data.org>
BugReports: https://github.com/epiverse-trace/linelist/issues
License: MIT + file LICENSE
URL: https://epiverse-trace.github.io/linelist/, https://github.com/epiverse-trace/linelist
NeedsCompilation: no
Language: en-GB
Materials: NEWS
In views: Epidemiology
CRAN checks: linelist results

Documentation:

Reference manual: linelist.pdf
Vignettes: Compatibility with dplyr
Design Principles for linelist
An introduction to linelist

Downloads:

Package source: linelist_1.1.0.tar.gz
Windows binaries: r-devel: linelist_1.0.0.zip, r-release: linelist_1.0.0.zip, r-oldrel: linelist_1.0.0.zip
macOS binaries: r-release (arm64): linelist_1.0.0.tgz, r-oldrel (arm64): linelist_1.0.0.tgz, r-release (x86_64): linelist_1.0.0.tgz
Old sources: linelist archive

Linking:

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