forestcox
when categorical binary
outcomeforestglm
when categorical
covariatesforestcox
and forestglm
with
datatype of P value in tableforestcox
forestcox
addOverall
options to
svyCreateTableOneJS
TableSubgroupCox
weights
option to
TableSubgroupCox
and TableSubgroupMultiCox
for
marginal cox model. ex: weights = "weights"
strata
option to
TableSubgroupCox
and TableSubgroupMultiCox
for
marginal cox model. ex: strata = "sex"
TableSubgroupMultiCox
with clusterTableSubgroupCox
and
TableSubgroupMultiCox
cox2.display
.cluster
option to
TableSubgroupCox
and TableSubgroupMultiCox
for
marginal cox model. ex: cluster = "inst"
forestcox
and forestglm
.svycox
and
svyglm
.lmer
.coxme
.cox2
.glmshow
.normalityTest
option to
CreateTableOneJS
to perform the Shapiro test for all
variables.glmshow.display
and TableSubgroupMultiGLM
mort
TableSubgroupGLM
: thanks for
weisx2022
TableSubgroupCox
: thanks for
ciciing
svyglm
( thanks
for cyk0315
)addOverall
options to CreateTableOneJS
and svyCreateTableOneJS
to add overall column.mk.lev
LabelepiDisplay
: thanks for
thisis05
TableSubgroupCox
: thanks for
Ding-yuan Wan
coxme.display
: thanks for
Cristina Ganuza Vallejo
TableSubgroupGLM
&
TableSubgroupCox
allow subgroup variable with
continuous.*.display
: univariate analysis with
stats::update
svyCreateTableOneJS
in example/test.svycox.display
Remove dependency with group_split
function
(dplyr package)
Use survey::regTermTest
for interaction p
calculation with survey::svycoxph
.
CreateTableOneJS
,
svyCreateTableOneJS
: when with labeldata, variables other
than numeric or factor types are excluded.TableSubgroupGLM
,
TableSubgroupMultiGLM
: p valueTableSubgroupGLM
,
TableSubgroupMultiGLM
: subgroup analysis for GLM(gaussian,
logistic)showpm
option with showAllLevels = F
when
no strata.TableSubgroupCox
: apply extend = T
option to summary.survfit
LabelepiDisplay
, LabeljsTable
with only
1 independent variable.
CreateTableOneJS
, svyCreateTableOneJS
: Add
showpm
option to show normal distributed continuous
variables as Mean ± SD.LabelepiDisplay
, LabeljsTable
:
label error.TableSubgroupCox
: error with too large
time_eventrateBugfix TableSubgroupCox
: error with factor variable
including NA
.
Update TableSubgroupCox
: compatible with upcoming
survival pacakge update.
svycox.display
: compatible with upcoming
survival pacakge update.CreateTableOneJS
with 2 level
strata & psub = F
.Additional bug fix: match with survival3.1-x.
class
issue:
https://developer.r-project.org/Blog/public/2019/11/09/when-you-think-class.-think-again/index.html
TableSubgroupCox
.TableSubgroupCox
.geeglm.display
.CreateTableOneJS
and svyCreateTableOneJS
can get simplified table with showAllLevels = F
option.TableSubgroupMultiCox
: Get sub-group analysis
table for forestplot with Cox/svycox
model.CreateTableOneJS
and
svyCreateTableOneJS
according to tableone
package(0.10.0).cox2.display
Update travis-ci
Add appveyor CI to test window environment
Add vignettes
glmshow.display
svyCreateTableOne2
, svyCreateTableOneJS
,
LabelJsTable
, LabelepiDisplay
and
svyregress.display
coefNA
can be used in
svyregress.display
svyglm
function.
Apply testhat.
Auto-selection between Chi-square test and
Fisher’s exact test in CreateTableOneJS
,
CreateTableOne2
.
Table 1 for survey data: svyCreateTableOne2
and
svyCreateTableOneJS
are modified functions of
svyCreateTableOne
(tableone
package).
New function: coefNA
Bug fixes: Coefficients in glmshow.display
,
cox2.display
cox2.display
glmshow.display
,
cox2.display
, geeglm.display
,
coxme.display
glmshow.display
: table from
glm.object
.LabelepiDisplay
: column name issue.svycox.display
: table from svycoxph.object
in survey packagesvyregress.display
: table from
svyglm.object
in survey packageUpdate: cox2.display
function allows
data
argument.
Remove jsBasicGadget
: Move to
jsmodule package.
Shiny gadget for descriptive statistics:
jsBasicGadget
Rstudio Addin of jsBasicGadget
:
jsBasicAddin
geeExp
, lmerExp
functioncoxExp
, cox2.display
functionTable from coxph.object
(survival
package) - allow cluster
& frailty
options: cox2.display
function
Apply label information to cox2.display
:
LabeljsCox
function
Apply label information to geeglm.display
:
LabeljsGeeglm
function
geeglm.display
functionApply label information to epiDisplay.object
:
LabelepiDisplay
function
Apply label information to lmer.display
,
coxme.display
: LabeljsMixed
function
coxme.object
(coxme
package): coxme.display
functionopt.tb1
from 10 to
25.