countsplit: Splitting a Count Matrix into Independent Folds

Implements the count splitting methodology from Neufeld et al. (2022) <doi:10.1093/biostatistics/kxac047> and Neufeld et al. (2023) <arXiv:2307.12985>. Intended for turning a matrix of single-cell RNA sequencing counts, or similar count datasets, into independent folds that can be used for training/testing or cross validation. Assumes that the entries in the matrix are from a Poisson or a negative binomial distribution.

Version: 4.0.0
Depends: R (≥ 2.10)
Imports: Matrix, methods, Rcpp
LinkingTo: Rcpp
Suggests: knitr, rmarkdown
Published: 2023-08-24
Author: Anna Neufeld [aut, cre, cph], Mischko Heming [ctb], Joshua Popp [ctb]
Maintainer: Anna Neufeld <aneufeld at fredhutch.org>
BugReports: https://github.com/anna-neufeld/countsplit/issues
License: MIT + file LICENSE
URL: https://github.com/anna-neufeld/countsplit
NeedsCompilation: yes
Materials: README NEWS
CRAN checks: countsplit results

Documentation:

Reference manual: countsplit.pdf

Downloads:

Package source: countsplit_4.0.0.tar.gz
Windows binaries: r-devel: countsplit_4.0.0.zip, r-release: countsplit_4.0.0.zip, r-oldrel: countsplit_4.0.0.zip
macOS binaries: r-release (arm64): countsplit_4.0.0.tgz, r-oldrel (arm64): countsplit_4.0.0.tgz, r-release (x86_64): countsplit_4.0.0.tgz

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