biopixR: Extracting Insights from Biological Images

Combines the 'magick' and 'imager' packages to streamline image analysis, focusing on feature extraction and quantification from biological images, especially microparticles. By providing high throughput pipelines and clustering capabilities, 'biopixR' facilitates efficient insight generation for researchers (Schneider J. et al. (2019) <doi:10.21037/jlpm.2019.04.05>).

Version: 1.1.0
Depends: R (≥ 4.2.0), imager, magick, tcltk
Imports: data.table, cluster
Suggests: knitr, rmarkdown, doParallel, kohonen, imagerExtra, GPareto, foreach
Published: 2024-06-24
DOI: 10.32614/CRAN.package.biopixR
Author: Tim Brauckhoff ORCID iD [aut, cre], Stefan Roediger ORCID iD [ctb], Coline Kieffer [ctb]
Maintainer: Tim Brauckhoff <brauctile at>
License: LGPL (≥ 3)
NeedsCompilation: no
Language: en-US
Materials: README ChangeLog
CRAN checks: biopixR results


Reference manual: biopixR.pdf
Vignettes: biopixR - Introduction


Package source: biopixR_1.1.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): biopixR_1.1.0.tgz, r-oldrel (arm64): biopixR_1.1.0.tgz, r-release (x86_64): biopixR_1.1.0.tgz, r-oldrel (x86_64): biopixR_1.1.0.tgz
Old sources: biopixR archive


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