Last updated on 2023-03-22 03:51:24 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.1.1 | 11.54 | 298.72 | 310.26 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 2.1.1 | 9.16 | 221.94 | 231.10 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 2.1.1 | 400.63 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 2.1.1 | 393.12 | ERROR | |||
| r-patched-linux-x86_64 | 2.1.1 | 10.64 | 282.52 | 293.16 | ERROR | |
| r-release-linux-x86_64 | 2.1.1 | 13.38 | 281.67 | 295.05 | ERROR | |
| r-release-macos-arm64 | 2.1.1 | 103.00 | NOTE | |||
| r-release-macos-x86_64 | 2.1.1 | 133.00 | NOTE | |||
| r-release-windows-x86_64 | 2.1.1 | 113.00 | 336.00 | 449.00 | ERROR | |
| r-oldrel-macos-arm64 | 2.1.1 | 94.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 2.1.1 | 135.00 | NOTE | |||
| r-oldrel-windows-ix86+x86_64 | 2.1.1 | 24.00 | 348.00 | 372.00 | ERROR |
Version: 2.1.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [63s/75s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(photosynthesis)
Loading required package: ggplot2
Loading required package: minpack.lm
Loading required package: units
udunits database from /usr/share/xml/udunits/udunits2.xml
>
> test_check("photosynthesis")
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name1
),
...
)
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name1
),
...
)
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name2
),
...
)
|
| | 0%
|
|=================================== | 50%
|
|======================================================================| 100%[ FAIL 6 | WARN 2 | SKIP 0 | PASS 320 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-fit_aq_response2.R:12:3'): 'fit_photosynthesis()' accepts data.frames and tibbles ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:13:3'): 'fit_photosynthesis()' accepts data.frames and tibbles ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:31:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:34:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:37:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:44:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
[ FAIL 6 | WARN 2 | SKIP 0 | PASS 320 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 2.1.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [48s/73s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(photosynthesis)
Loading required package: ggplot2
Loading required package: minpack.lm
Loading required package: units
udunits database from /usr/share/xml/udunits/udunits2.xml
>
> test_check("photosynthesis")
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name1
),
...
)
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name1
),
...
)
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name2
),
...
)
|
| | 0%
|
|=================================== | 50%
|
|======================================================================| 100%[ FAIL 6 | WARN 2 | SKIP 0 | PASS 320 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-fit_aq_response2.R:12:3'): 'fit_photosynthesis()' accepts data.frames and tibbles ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:13:3'): 'fit_photosynthesis()' accepts data.frames and tibbles ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:31:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:34:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:37:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:44:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
[ FAIL 6 | WARN 2 | SKIP 0 | PASS 320 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 2.1.1
Check: installed package size
Result: NOTE
installed size is 7.2Mb
sub-directories of 1Mb or more:
doc 6.1Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64
Version: 2.1.1
Check: data for non-ASCII characters
Result: NOTE
Note: found 13 marked UTF-8 strings
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 2.1.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/235s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(photosynthesis)
Loading required package: ggplot2
Loading required package: minpack.lm
Loading required package: units
udunits database from /usr/share/udunits/udunits2.xml
>
> test_check("photosynthesis")
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name1
),
...
)
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name1
),
...
)
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name2
),
...
)
|
| | 0%
|
|=================================== | 50%
|
|======================================================================| 100%[ FAIL 6 | WARN 2 | SKIP 0 | PASS 320 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-fit_aq_response2.R:12:3'): 'fit_photosynthesis()' accepts data.frames and tibbles ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:13:3'): 'fit_photosynthesis()' accepts data.frames and tibbles ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:31:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:34:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:37:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:44:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
[ FAIL 6 | WARN 2 | SKIP 0 | PASS 320 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 2.1.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/216s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(photosynthesis)
Loading required package: ggplot2
Loading required package: minpack.lm
Loading required package: units
udunits database from /usr/share/udunits/udunits2.xml
>
> test_check("photosynthesis")
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name1
),
...
)
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name1
),
...
)
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name2
),
...
)
|
| | 0%
|
|=================================== | 50%
|
|======================================================================| 100%[ FAIL 6 | WARN 2 | SKIP 0 | PASS 320 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-fit_aq_response2.R:12:3'): 'fit_photosynthesis()' accepts data.frames and tibbles ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:13:3'): 'fit_photosynthesis()' accepts data.frames and tibbles ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:31:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:34:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:37:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:44:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
[ FAIL 6 | WARN 2 | SKIP 0 | PASS 320 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 2.1.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [61s/70s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(photosynthesis)
Loading required package: ggplot2
Loading required package: minpack.lm
Loading required package: units
udunits database from /usr/share/xml/udunits/udunits2.xml
>
> test_check("photosynthesis")
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name1
),
...
)
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name1
),
...
)
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name2
),
...
)
|
| | 0%
|
|=================================== | 50%
|
|======================================================================| 100%[ FAIL 6 | WARN 2 | SKIP 0 | PASS 320 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-fit_aq_response2.R:12:3'): 'fit_photosynthesis()' accepts data.frames and tibbles ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:13:3'): 'fit_photosynthesis()' accepts data.frames and tibbles ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:31:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:34:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:37:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:44:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
[ FAIL 6 | WARN 2 | SKIP 0 | PASS 320 ]
Error: Test failures
Execution halted
Flavor: r-patched-linux-x86_64
Version: 2.1.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [59s/68s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(photosynthesis)
Loading required package: ggplot2
Loading required package: minpack.lm
Loading required package: units
udunits database from /usr/share/xml/udunits/udunits2.xml
>
> test_check("photosynthesis")
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name1
),
...
)
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name1
),
...
)
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name2
),
...
)
|
| | 0%
|
|=================================== | 50%
|
|======================================================================| 100%[ FAIL 6 | WARN 2 | SKIP 0 | PASS 320 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-fit_aq_response2.R:12:3'): 'fit_photosynthesis()' accepts data.frames and tibbles ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:13:3'): 'fit_photosynthesis()' accepts data.frames and tibbles ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:31:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:34:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:37:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:44:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
[ FAIL 6 | WARN 2 | SKIP 0 | PASS 320 ]
Error: Test failures
Execution halted
Flavor: r-release-linux-x86_64
Version: 2.1.1
Check: tests
Result: ERROR
Running 'testthat.R' [50s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(photosynthesis)
Loading required package: ggplot2
Loading required package: minpack.lm
Loading required package: units
udunits database from D:/RCompile/CRANpkg/lib/4.2/units/share/udunits/udunits2.xml
>
> test_check("photosynthesis")
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name1
),
...
)
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name1
),
...
)
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name2
),
...
)
|
| | 0%
|
|=================================== | 50%
|
|======================================================================| 100%[ FAIL 6 | WARN 2 | SKIP 0 | PASS 320 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-fit_aq_response2.R:12:3'): 'fit_photosynthesis()' accepts data.frames and tibbles ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:13:3'): 'fit_photosynthesis()' accepts data.frames and tibbles ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:31:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:34:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:37:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
── Failure ('test-fit_aq_response2.R:44:3'): .vars argument renames variables ──
Expected `{ ... }` to run without any conditions.
ℹ Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. ℹ Please use
`purrr::list_flatten()` or `purrr::list_c()`.
[ FAIL 6 | WARN 2 | SKIP 0 | PASS 320 ]
Error: Test failures
Execution halted
Flavor: r-release-windows-x86_64
Version: 2.1.1
Check: tests
Result: ERROR
Running 'testthat.R' [73s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(photosynthesis)
Loading required package: ggplot2
Loading required package: minpack.lm
Loading required package: units
udunits database from D:/temp/RtmpGsKpyp/RLIBS_147b4305215dc/units/share/udunits/udunits2.xml
>
> test_check("photosynthesis")
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name1
),
...
)
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name1
),
...
)
You may need to revise .vars argument by replacing `var_name1`, etc. with variable name in your_data:
fit_photosynthesis(
.data = your_data,
.photo_fun = 'aq_response',
.model = 'marshall_biscoe_1980',
.method = 'ls',
.vars = list(
.A = var_name1,
.Q = var_name2
),
...
)
|
| | 0%
|
|=================================== | 50%
|
|======================================================================| 100%[ FAIL 6 | WARN 2 | SKIP 0 | PASS 320 ]
== Failed tests ================================================================
-- Failure ('test-fit_aq_response2.R:12:3'): 'fit_photosynthesis()' accepts data.frames and tibbles --
Expected `{ ... }` to run without any conditions.
i Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. i Please use
`purrr::list_flatten()` or `purrr::list_c()`.
-- Failure ('test-fit_aq_response2.R:13:3'): 'fit_photosynthesis()' accepts data.frames and tibbles --
Expected `{ ... }` to run without any conditions.
i Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. i Please use
`purrr::list_flatten()` or `purrr::list_c()`.
-- Failure ('test-fit_aq_response2.R:31:3'): .vars argument renames variables --
Expected `{ ... }` to run without any conditions.
i Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. i Please use
`purrr::list_flatten()` or `purrr::list_c()`.
-- Failure ('test-fit_aq_response2.R:34:3'): .vars argument renames variables --
Expected `{ ... }` to run without any conditions.
i Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. i Please use
`purrr::list_flatten()` or `purrr::list_c()`.
-- Failure ('test-fit_aq_response2.R:37:3'): .vars argument renames variables --
Expected `{ ... }` to run without any conditions.
i Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. i Please use
`purrr::list_flatten()` or `purrr::list_c()`.
-- Failure ('test-fit_aq_response2.R:44:3'): .vars argument renames variables --
Expected `{ ... }` to run without any conditions.
i Actually got a <lifecycle_stage>:
Condition:
`flatten()` is deprecated as of rlang 1.1.0. i Please use
`purrr::list_flatten()` or `purrr::list_c()`.
[ FAIL 6 | WARN 2 | SKIP 0 | PASS 320 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64