Last updated on 2024-11-02 20:49:28 CET.
Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
---|---|---|---|---|---|---|
r-devel-linux-x86_64-debian-clang | 0.4-11 | 11.47 | 236.52 | 247.99 | NOTE | |
r-devel-linux-x86_64-debian-gcc | 0.4-11 | 7.70 | 180.67 | 188.37 | NOTE | |
r-devel-linux-x86_64-fedora-clang | 0.4-11 | 381.95 | NOTE | |||
r-devel-linux-x86_64-fedora-gcc | 0.4-11 | 382.41 | NOTE | |||
r-devel-windows-x86_64 | 0.4-11 | 12.00 | 326.00 | 338.00 | NOTE | |
r-patched-linux-x86_64 | 0.4-11 | 11.62 | 225.60 | 237.22 | NOTE | |
r-release-linux-x86_64 | 0.4-11 | 10.32 | 214.55 | 224.87 | ERROR | |
r-release-macos-arm64 | 0.4-11 | 128.00 | NOTE | |||
r-release-macos-x86_64 | 0.4-11 | 204.00 | NOTE | |||
r-release-windows-x86_64 | 0.4-11 | 12.00 | 324.00 | 336.00 | NOTE | |
r-oldrel-macos-arm64 | 0.4-11 | 152.00 | OK | |||
r-oldrel-macos-x86_64 | 0.4-11 | 245.00 | OK | |||
r-oldrel-windows-x86_64 | 0.4-11 | 14.00 | 362.00 | 376.00 | OK |
Version: 0.4-11
Check: Rd files
Result: NOTE
checkRd: (-1) build_lastdose.Rd:10: Lost braces
10 | code{build_lastdose}: build PK oral with lastdose information
| ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
18 | code{colflow_mod}: build a comparison of potentially duplicate flow data
| ^
checkRd: (-1) mod-internal.Rd:21: Lost braces
21 | code{findMedFlowRow_mod}: find row numbers for matching ID and time
| ^
checkRd: (-1) mod-internal.Rd:23: Lost braces
23 | code{flowData_mod}: correct flow data
| ^
checkRd: (-1) mod-internal.Rd:25: Lost braces
25 | code{concData_mod}: correct concentration data
| ^
checkRd: (-1) mod-internal.Rd:27: Lost braces
27 | code{infusionData_mod}: combine flow and MAR data; standardize hourly rate,
| ^
checkRd: (-1) mod-internal.Rd:30: Lost braces
30 | code{resolveDoseDups_mod}: correct duplicated infusion and bolus doses
| ^
checkRd: (-1) mod-internal.Rd:32: Lost braces
32 | code{writeCheckData}
| ^
checkRd: (-1) mod-internal.Rd:34: Lost braces
34 | code{processErx}: prepare e-prescription data
| ^
checkRd: (-1) mod-internal.Rd:36: Lost braces
36 | code{processErxAddl}: additional processing, checking for connected observations
| ^
checkRd: (-1) mod-internal.Rd:38: Lost braces
38 | code{validateColumns}: check columns are in place
| ^
checkRd: (-1) mod-internal.Rd:40: Lost braces
40 | code{read}: generic read function
| ^
checkRd: (-1) mod-internal.Rd:42: Lost braces
42 | code{setDoseMar}: set unit/rate/date columns
| ^
checkRd: (-1) pk-internal.Rd:19: Lost braces
19 | code{takeClosest}: take value at nearest time
| ^
checkRd: (-1) pk-internal.Rd:22: Lost braces
22 | code{takeClosestTime}: find nearest time
| ^
checkRd: (-1) pk-internal.Rd:24: Lost braces
24 | code{daysDiff}: number of days between two dates
| ^
checkRd: (-1) pk-internal.Rd:26: Lost braces
26 | code{minDiff}: difference (in minutes) of time vector
| ^
checkRd: (-1) pk-internal.Rd:28: Lost braces
28 | code{fixDates}: add leading zeroes to date
| ^
checkRd: (-1) pk-internal.Rd:30: Lost braces
30 | code{joinFlowMar}: rbind two data sets
| ^
checkRd: (-1) pk-internal.Rd:32: Lost braces
32 | code{updateInterval_mod}: replace maxint with difference between surgery time
| ^
checkRd: (-1) pk-internal.Rd:35: Lost braces
35 | code{fix_serum_time}: create time variable
| ^
checkRd: (-1) pk-internal.Rd:37: Lost braces
37 | code{merge_by_time}: impute in x by closest time in y
| ^
checkRd: (-1) pk-internal.Rd:39: Lost braces
39 | code{merge_inf_bolus}: combine infusion and bolus into one hourly dose file
| ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
41 | code{addZeroDose}: add rows of zero dose, after a gap
| ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
43 | code{pkdata}
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Version: 0.4-11
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking: 'glmnet', 'logistf'
Flavor: r-release-linux-x86_64
Version: 0.4-11
Check: examples
Result: ERROR
Running examples in ‘EHR-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: Logistf
> ### Title: Firth's penalized-likelihood logistic regression with more
> ### decimal places of p-value than 'logistf' function in the R package
> ### 'logistf'
> ### Aliases: Logistf
>
> ### ** Examples
>
> data(dataPheWAS)
> fit <- Logistf(X264.3 ~ exposure + age + race + gender, data=dd)
Error: Logistf requires the logistf package, please install it.
Execution halted
Flavor: r-release-linux-x86_64
Version: 0.4-11
Check: HTML version of manual
Result: NOTE
Skipping checking math rendering: package 'V8' unavailable
Flavor: r-release-linux-x86_64